Simple Bash command line to reduce the length of the FASTA header lines
Hi there, how many times we have a FASTA file that contains huge FASTA headers like this:
>gi|600513|gb|M21306.1|DROTRPC Drosophila melanogaster photoreceptor...
Handling large FASTA sequence datasets in R: Shuffle and retrieve "n" number of sequences of fixed length from the whole FASTA file and export them in a new FASTA file
When you are working with large FASTA datasets is likely to find out that the sequences are in sort of a mixed...
Extracting upstream regions of a RefSeq human gene list in R using Bioconductor
Suppose that you want to do local mapping of upstream regions of a given RefSeq IDs in a particular genome in R using Bioconductor. Download the script here.
In this case, you may take a look at...